BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024F01SP1|AL428241
(1101 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 2039 0.0
>3x_Contig1428
Length = 9146
Score = 2039 bits (1024), Expect = 0.0
Identities = 1089/1107 (98%), Gaps = 6/1107 (0%)
Strand = Plus / Plus
Query: 1 gatcctagtatcatgtatatctcggggagagcctcaacgctcggcatctggaattgattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 gatcctagtatcatgtatatctcggggagagcctcaacgctcggcatctggaattgattt 3028
Query: 61 cctactaccggctgggaggccttattgaatattcttaccccttcaaaggggcccagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 cctactaccggctgggaggccttattgaatattcttaccccttcaaaggggcccagataa 3088
Query: 121 tgccgtaataatcggttttaggaactgggaatcacgtgatgtcacgtgattnccagttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3089 tgccgtaataatcggttttaggaactgggaatcacgtgatgtcacgtgattcccagttca 3148
Query: 181 cgtaaatkatattcctctttcctttacctacaggttatggcatttacactatatcctgta 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 cgtaaatgatattcctctttcctttacctacaggttatggcatttacactatatcctgta 3208
Query: 241 tagaacaaggcgttgtttattttgcagcacagagcacgacatgtagccgatagccagcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 tagaacaaggcgttgtttattttgcagcacagagcacgacatgtagccgatagccagcac 3268
Query: 301 tgtcagccaattttactcaacttctcatggatgctttgaagcaacgacatttgaagttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 tgtcagccaattttactcaacttctcatggatgctttgaagcaacgacatttgaagttgc 3328
Query: 361 tgtacaggcagcgtggtagtgcttcaagaactattgattacgatgtggtaattgaaccag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3329 tgtacaggcagcgtggtagtgcttcaagaactattgattacgatgtggtaattgaaccag 3388
Query: 421 agttgagagaagatggcgatttggttacagatagtcaattgacggaacaggacgaccaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3389 agttgagagaagatggcgatttggttacagatagtcaattgacggaacaggacgaccaga 3448
Query: 481 gttttcctgacatacaagtwccgtctccggatcgtgttgacgatttcgatctaaatcaag 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 gttttcctgacatacaagtaccgtctccggatcgtgttgacgatttcgatctaaatcaag 3508
Query: 541 gagatggtttgatggacaaggcaacggcaaacgaagatgatatagatcacgtgattggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3509 gagatggtttgatggacaaggcaacggcaaacgaagatgatatagatcacgtgattggtg 3568
Query: 601 atgaggttgctgccgtaaacgcaccggtggaaacatctgatcttgttatagatacgactc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3569 atgaggttgctgccgtaaacgcaccggtggaaacatctgatcttgttatagatacgactc 3628
Query: 661 agtttgattcaatgactctatcacaactatccacgccacttacgtcgatggctaccatcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3629 agtttgattcaatgactctatcacaactatccacgccacttacgtcgatggctaccatcg 3688
Query: 721 atgttctgcgaagattgcttgaaactgtgatactagtaacaatagaagaacgaacttcgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3689 atgttctgcgaagattgcttgaaactgtgatactagtaacaatagaagaacgaacttcgc 3748
Query: 781 aatttaacagagctggctctgctagattaagattaaaactaaagctggaaatcaagatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3749 aatttaacagagctggctctgctagattaagattaaaactaaagctggaaatcaagatat 3808
Query: 841 tgacatggttcctacatcaatccaaggaagaccttattaccatctcagaattaaatttgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3809 tgacatggttcctacatcaatccaaggaagaccttattaccatctcagaattaaatttgt 3868
Query: 901 ccaataacgatcttttgtacagattaaaacagatttccctcttaaaaaattccttatcac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3869 ccaataacgatcttttgtacagattaaaacagatttccctcttaaaaaattccttatcac 3928
Query: 961 gatcactattggrcgtgcgasgc-aaatcagctcatatgagggggcgaacaatgcattat 1019
|||||||||||| ||||||| || ||||||||||||||||||| |||||||||||||||
Sbjct: 3929 gatcactattggacgtgcgaagcgcaatcagctcatatgaggggccgaacaatgcattat 3988
Query: 1020 ctgaaggamaagtagcattkcagaacttc-aacggatcaatgaactgatt-twtctcaaa 1077
|||| | | |||||||||| ||||||||| |||||||||||||||||||| | |||||||
Sbjct: 3989 ctgaggaacaagtagcattgcagaacttcaaacggatcaatgaactgattctatctcaaa 4048
Query: 1078 gg-tcgata-catcatc-acaataatt 1101
|| |||||| ||||||| |||||||||
Sbjct: 4049 ggatcgataccatcatcaacaataatt 4075
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7094
Number of Sequences: 1807
Number of extensions: 7094
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 1101
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1085
effective length of database: 10,329,639
effective search space: 11207658315
effective search space used: 11207658315
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)